Information for 5-CCGCCGCCCGCG (Motif 14)


Reverse Opposite:

p-value:1e-7
log p-value:-1.697e+01
Information Content per bp:1.868
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif10.66%
Number of Background Sequences with motif705.7
Percentage of Background Sequences with motif1.49%
Average Position of motif in Targets140.7 +/- 117.7bp
Average Position of motif in Background172.5 +/- 118.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0162.2_EGR1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCGCCGCCCGCG--
CCCCCGCCCCCGCC

PB0010.1_Egr1_1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CCGCCGCCCGCG----
--TCCGCCCCCGCATT

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCGCCGCCCGCG--
--YCCGCCCACGCN

MA0472.1_EGR2/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCGCCGCCCGCG---
CCCCCGCCCACGCAC

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCGCCGCCCGCG
GCCCCGCCCCCTCCC

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCGCCGCCCGCG-
GGTCCCGCCCCCTTCTC

MA0079.3_SP1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCGCCGCCCGCG
GCCCCGCCCCC-

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCGCCGCCCGCG--
----CRCCCACGCA

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCGCCGCCCGCG
GGCCCCGCCCCC-

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCGCCGCCCGCG
NAGCCCCGCCCCCN