Information for 6-TCCAAACACAGG (Motif 15)


Reverse Opposite:

p-value:1e-7
log p-value:-1.658e+01
Information Content per bp:1.823
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif5.74%
Number of Background Sequences with motif131.2
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets160.7 +/- 107.4bp
Average Position of motif in Background166.9 +/- 103.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCCAAACACAGG
-NAAACCACAG-

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCCAAACACAGG
--AAACCACAGC

MA0002.2_RUNX1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCCAAACACAGG-
--AAACCACAGAN

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TCCAAACACAGG
------CACAGN

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCCAAACACAGG------
--CAATCACTGGCAGAAT

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCCAAACACAGG
--AAACCACANN

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TCCAAACACAGG-
AACACCAAAACAAAGGA

MA0483.1_Gfi1b/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCCAAACACAGG-
--AAATCACAGCA

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCCAAACACAGG-
-NWAACCACADNN

MA0038.1_Gfi1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCCAAACACAGG
-CAAATCACTG-