Information for 1-TGTACATGTGTG (Motif 1)


Reverse Opposite:

p-value:1e-145
log p-value:-3.358e+02
Information Content per bp:1.857
Number of Target Sequences with motif514.0
Percentage of Target Sequences with motif27.14%
Number of Background Sequences with motif2105.4
Percentage of Background Sequences with motif7.49%
Average Position of motif in Targets126.6 +/- 63.4bp
Average Position of motif in Background125.7 +/- 172.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)3.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0086.1_Irx5/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGTACATGTGTG--
ANTNNTACATGTANNTN

PH0082.1_Irx2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGTACATGTGTG---
TAAATACATGTAAAATT

PH0087.1_Irx6/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGTACATGTGTG--
ANTTNTACATGTANTTN

PH0085.1_Irx4/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGTACATGTGTG--
NNTTTTACATGTANNNT

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGTACATGTGTG--
ANTATTACATGTANNNN

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGTACATGTGTG--
NNTATTACATGTANNNT

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGTACATGTGTG-----
-NNGCGTGTGTGCNGCN

MA0058.2_MAX/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGTACATGTGTG-
---CCATGTGCTT

MA0464.1_Bhlhe40/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGTACATGTGTG
-NTGCACGTGAG

MA0103.2_ZEB1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGTACATGTGTG-
----CAGGTGAGG