Information for 19-CATCGTTAGGTG (Motif 12)


Reverse Opposite:

p-value:1e-18
log p-value:-4.216e+01
Information Content per bp:1.883
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets113.1 +/- 60.1bp
Average Position of motif in Background146.5 +/- 44.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CATCGTTAGGTG------
-NTNNTTAAGTGGNTNAN

PH0004.1_Nkx3-2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CATCGTTAGGTG------
-NTNNTTAAGTGGTTANN

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.61
Offset:7
Orientation:forward strand
Alignment:CATCGTTAGGTG---
-------AGGTGTCA

PH0115.1_Nkx2-6/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CATCGTTAGGTG-----
-AATNTTAAGTGGNTNN

MA0009.1_T/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CATCGTTAGGTG----
-----CTAGGTGTGAA

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CATCGTTAGGTG--
----NNCAGGTGNN

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CATCGTTAGGTG-------
---GCGGAGGTGTCGCCTC

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CATCGTTAGGTG--
AAACATAATGAGGTTGC

MA0087.1_Sox5/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CATCGTTAGGTG
-ATTGTTA----

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CATCGTTAGGTG--
------TACGTGCV