Information for 12-TACTATGTAT (Motif 13)


Reverse Opposite:

p-value:1e-18
log p-value:-4.160e+01
Information Content per bp:1.741
Number of Target Sequences with motif196.0
Percentage of Target Sequences with motif10.35%
Number of Background Sequences with motif1480.5
Percentage of Background Sequences with motif5.27%
Average Position of motif in Targets126.6 +/- 64.6bp
Average Position of motif in Background122.0 +/- 133.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0033.1_FOXL1/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:TACTATGTAT-
---TATGTNTA

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TACTATGTAT------
ATGGGATATATCCGCCT

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TACTATGTAT--
--CTATTTTTGG

MA0124.1_NKX3-1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TACTATGTAT
---TAAGTAT

MA0052.2_MEF2A/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TACTATGTAT----
NNGCTATTTTTAGCN

MF0008.1_MADS_class/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TACTATGTAT--
--CCATATATGG

PB0080.1_Tbp_1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TACTATGTAT-----
TCTTTATATATAAATA

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TACTATGTAT---
-KCTATTTTTRGH

MA0497.1_MEF2C/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TACTATGTAT-----
TTCTATTTTTAGNNN

PH0148.1_Pou3f3/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TACTATGTAT-----
TNNATTATGCATANNTT