Information for 20-GKCCTCTCTGAS (Motif 15)


Reverse Opposite:

p-value:1e-16
log p-value:-3.772e+01
Information Content per bp:1.653
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets131.3 +/- 74.7bp
Average Position of motif in Background140.2 +/- 42.5bp
Strand Bias (log2 ratio + to - strand density)3.9
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GKCCTCTCTGAS----
NNNTGAACTCNNTGACCTCN

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GKCCTCTCTGAS
NNGCACCTTTCTCC-

MA0037.2_GATA3/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GKCCTCTCTGAS
-TCTTATCT---

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GKCCTCTCTGAS
---CTGTCTGG-

MA0482.1_Gata4/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GKCCTCTCTGAS
-TCTTATCTCCC

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GKCCTCTCTGAS
-VBSYGTCTGG-

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GKCCTCTCTGAS----
NNTNNTGTCTGGNNTNG

MA0258.2_ESR2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GKCCTCTCTGAS--
AGGNCANNGTGACCT

MA0598.1_EHF/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GKCCTCTCTGAS
--CCTTCCTG--

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GKCCTCTCTGAS
NCCTTATCTG--