Information for 5-TGTATACACACA (Motif 2)


Reverse Opposite:

p-value:1e-125
log p-value:-2.890e+02
Information Content per bp:1.742
Number of Target Sequences with motif597.0
Percentage of Target Sequences with motif31.52%
Number of Background Sequences with motif3113.0
Percentage of Background Sequences with motif11.08%
Average Position of motif in Targets128.0 +/- 66.7bp
Average Position of motif in Background125.2 +/- 147.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TGTATACACACA-
TACATGTGCACATAAAA

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TGTATACACACA
NNNVCTGWGYAAACASN

PB0198.1_Zfp128_2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGTATACACACA--
TGTATATATATACC

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TGTATACACACA-
CAGATGTGCACATACGT

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGTATACACACA
CNTGTTTACATA--

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGTATACACACA--
AAAGTAAACAAAAATT

MA0157.1_FOXO3/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTATACACACA
TGTTTACA----

MA0593.1_FOXP2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGTATACACACA
AAGTAAACAAA--

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGTATACACACA-
AAAATGTAAACAAACAG

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTATACACACA
NDGTAAACARRN-