Information for 19-CTTTGATAGT (Motif 20)


Reverse Opposite:

p-value:1e-6
log p-value:-1.522e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets124.2 +/- 75.4bp
Average Position of motif in Background94.3 +/- 60.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGATAGT--
ATTTCCTTTGATCTATA

MA0523.1_TCF7L2/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CTTTGATAGT-
TNCCTTTGATCTTN

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGATAGT--
AATCCCTTTGATCTATC

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGATAGT
CCTTTGATGT-

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGATAGT--
NNTTCCTTTGATCTANA

MA0151.1_ARID3A/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTTTGATAGT
-TTTAAT---

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTTTGATAGT-
CCTTTTATAGNC

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGATAGT--
NNTTCCTTTGATCTNNA

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGATAGT---
NCNTTTGTTATTTNN

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTTTGATAGT
TNCCTTTGATGT-