Information for 24-TGACGABCTNGA (Motif 22)


Reverse Opposite:

p-value:1e-2
log p-value:-4.976e+00
Information Content per bp:1.532
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif49.8
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets102.8 +/- 60.3bp
Average Position of motif in Background108.8 +/- 50.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGACGABCTNGA
TGACGT------

PB0136.1_IRC900814_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGACGABCTNGA--
TTTTACGACTTTCCAT

PH0067.1_Hoxc12/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TGACGABCTNGA
GNNNTTTTACGACCTNA-

PH0077.1_Hoxd12/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TGACGABCTNGA
NNNATTTTACGACNNTN-

PH0076.1_Hoxd11/Jaspar

Match Rank:5
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------TGACGABCTNGA
ANNATTTTACGACNTNA-

PB0108.1_Atf1_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGACGABCTNGA
GAATGACGAATAAC-

PH0066.1_Hoxc11/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGACGABCTNGA
NNNTTTTACGACNTTN-

PH0047.1_Hoxa11/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGACGABCTNGA
NNGTTTTACGACTTTA-

PH0065.1_Hoxc10/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TGACGABCTNGA
ANNTTTTACGACNTNN-

PB0004.1_Atf1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TGACGABCTNGA
ACGATGACGTCATCGA