Information for 10-TGCADGTG (Motif 6)


Reverse Opposite:

p-value:1e-40
log p-value:-9.338e+01
Information Content per bp:1.876
Number of Target Sequences with motif311.0
Percentage of Target Sequences with motif16.42%
Number of Background Sequences with motif2029.2
Percentage of Background Sequences with motif7.22%
Average Position of motif in Targets116.6 +/- 73.6bp
Average Position of motif in Background128.6 +/- 118.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0464.1_Bhlhe40/Jaspar

Match Rank:1
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-TGCADGTG--
NTGCACGTGAG

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TGCADGTG--
NNCAGGTGNN

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.78
Offset:1
Orientation:forward strand
Alignment:TGCADGTG---
-KCACGTGMCN

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:4
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---TGCADGTG------
ATCCACAGGTGCGAAAA

MA0103.2_ZEB1/Jaspar

Match Rank:5
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:TGCADGTG---
--CAGGTGAGG

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:TGCADGTG--
--CACGTGNC

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TGCADGTG---
-CCACGTGGNN

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TGCADGTG--
--CACGTGDC

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:9
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TGCADGTG--
--CACGTGNT

MA0058.2_MAX/Jaspar

Match Rank:10
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TGCADGTG---
-CCATGTGCTT