Information for 12-TTCAACTCACAG (Motif 7)


Reverse Opposite:

p-value:1e-33
log p-value:-7.768e+01
Information Content per bp:1.935
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets128.6 +/- 73.5bp
Average Position of motif in Background124.7 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)2.5
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0483.1_Gfi1b/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTCAACTCACAG--
---AAATCACAGCA

MA0100.2_Myb/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTCAACTCACAG
-CCAACTGCCA-

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TTCAACTCACAG-
-------CACAGN

MA0038.1_Gfi1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTCAACTCACAG
--CAAATCACTG

MA0479.1_FOXH1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTCAACTCACAG
TCCAATCCACA-

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTCAACTCACAG-
---AAATCACTGC

MA0002.2_RUNX1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTCAACTCACAG--
---AAACCACAGAN

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TTCAACTCACAG-----
AACTACAATTCCCAGAATGC

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTCAACTCACAG--
CGACCAACTGCCATGC

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTCAACTCACAG
-CCAACTGCCA-