Information for 13-CGTTGGAAACGG (Motif 8)


Reverse Opposite:

p-value:1e-32
log p-value:-7.395e+01
Information Content per bp:1.530
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets118.9 +/- 62.5bp
Average Position of motif in Background70.9 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)4.2
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0152.1_NFATC2/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CGTTGGAAACGG
---TGGAAAA--

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGTTGGAAACGG
CSTGGGAAAD--

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGTTGGAAACGG---
CTACTTGGATACGGAAT

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGTTGGAAACGG
--TTTGAAACCG

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGTTGGAAACGG
-AATGGAAAAT-

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGTTGGAAACGG---
-----NHAACBGYYV

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGTTGGAAACGG---
NNTTTGCACACGGCCC

MA0600.1_RFX2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CGTTGGAAACGG---
GTTGCCATGGCAACCGCGG

MA0509.1_Rfx1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CGTTGGAAACGG
GTTGCCATGGCAAC--

MA0161.1_NFIC/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGTTGGAAACGG
--TTGGCA----