Information for 22-GAGTCAATGAAC (Motif 11)


Reverse Opposite:

p-value:1e-4
log p-value:-1.034e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets191.0 +/- 0.0bp
Average Position of motif in Background375.9 +/- 306.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GAGTCAATGAAC--
TAATTCAATGAAGTG

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GAGTCAATGAAC---
ACTATGAATGAATGAT

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong et al.)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAGTCAATGAAC--
AGGTCANTGACCTN

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAGTCAATGAAC----
CGACCCAATCAACGGTG

MA0099.2_JUN::FOS/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAGTCAATGAAC
TGAGTCA------

MA0078.1_Sox17/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAGTCAATGAAC
--GACAATGNN-

PB0197.1_Zfp105_2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAGTCAATGAAC---
ATGGTTCAATAATTTTG

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCAATGAAC
GATGAGTCAT-----

MA0477.1_FOSL1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCAATGAAC
NATGAGTCACC----

PH0174.1_Vax1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGTCAATGAAC--
CTNNGNTAATTAACNT