Information for 6-ATTGAACGGA (Motif 12)


Reverse Opposite:

p-value:1e-4
log p-value:-9.833e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets497.0 +/- 0.0bp
Average Position of motif in Background424.5 +/- 247.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0197.1_Zfp105_2/Jaspar

Match Rank:1
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------ATTGAACGGA
NAAANTTATTGAANCAN

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATTGAACGGA----
ACTATGAATGAATGAT

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATTGAACGGA--
NNNTATTGAATTGNNN

PB0075.1_Sp100_1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATTGAACGGA----
ATTTTACGGAAAAT

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ATTGAACGGA--
----AACCGANA

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATTGAACGGA
NTATYGATCH--

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATTGAACGGA--
--NHAACBGYYV

MA0151.1_ARID3A/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATTGAACGGA
ATTAAA----

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ATTGAACGGA----
----DCCGGAARYN

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------ATTGAACGGA
NNANTGATTGATNNNN