Information for 25-CAATTGGTAC (Motif 15)


Reverse Opposite:

p-value:1e-3
log p-value:-7.705e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif42.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets320.0 +/- 0.0bp
Average Position of motif in Background315.1 +/- 187.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAATTGGTAC----
TTATTAGTACATAN

PH0110.1_Nkx1-2/Jaspar

Match Rank:2
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------CAATTGGTAC-
GTGCACTAATTAGTGCA

PH0089.1_Isx/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CAATTGGTAC-
ACNNCTAATTAGNNNN

PB0177.1_Sox7_2/Jaspar

Match Rank:4
Score:0.66
Offset:-12
Orientation:reverse strand
Alignment:------------CAATTGGTAC
NNCNNNCNCANACAATTAGNAC

PH0007.1_Barx1/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CAATTGGTAC--
AAAGTAATTAGTGAAT

PH0127.1_Nobox/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CAATTGGTAC-
GNTNNCTAATTAGNNCG

PH0109.1_Nkx1-1/Jaspar

Match Rank:7
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------CAATTGGTAC-
NCCCACTAATTAGCGCA

PH0033.1_Gbx1/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CAATTGGTAC--
TNCACTAATTAGTNNNN

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CAATTGGTAC-
NNATNAATTGTTTNN

MA0125.1_Nobox/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAATTGGTAC
TAATTGGT--