Information for 1-CGGCCTCGAATG (Motif 3)


Reverse Opposite:

p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGGCCTCGAATG
AGGCCTAG----

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CGGCCTCGAATG-
---CCWGGAATGY

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGGCCTCGAATG-
---NCTGGAATGC

MA0146.2_Zfx/Jaspar

Match Rank:4
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CGGCCTCGAATG
GGGGCCGAGGCCTG-----

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CGGCCTCGAATG-
---CCWGGAATGY

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGGCCTCGAATG
AGGCCTNG----

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGGCCTCGAATG
TGACCTTGAN--

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGGCCTCGAATG---
TGWCCTCARNTGACC

MA0158.1_HOXA5/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CGGCCTCGAATG
----CACTAATT

MA0505.1_Nr5a2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CGGCCTCGAATG-
GCTGACCTTGAACTN