| p-value: | 1e-4 |
| log p-value: | -1.144e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 100.00% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 82.0 +/- 0.0bp |
| Average Position of motif in Background | 353.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
MA0503.1_Nkx2-5_(var.2)/Jaspar
| Match Rank: | 1 |
| Score: | 0.70
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GCACTCAAATGG
AGCCACTCAAG--- |
|
|
|
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 2 |
| Score: | 0.69
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GCACTCAAATGG
AASCACTCAA---- |
|
|
|
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
| Match Rank: | 3 |
| Score: | 0.67
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GCACTCAAATGG
RSCACTYRAG--- |
|
|
|
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
| Match Rank: | 4 |
| Score: | 0.66
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GCACTCAAATGG
AAGCACTTAA---- |
|
|
|
MA0122.1_Nkx3-2/Jaspar
| Match Rank: | 5 |
| Score: | 0.62
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GCACTCAAATGG
NCCACTTAN---- |
|
|
|
PB0208.1_Zscan4_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.61
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----GCACTCAAATGG
CGAAGCACACAAAATA |
|
|
|
MA0158.1_HOXA5/Jaspar
| Match Rank: | 7 |
| Score: | 0.59
| | Offset: | 3
| | Orientation: | forward strand |
| Alignment: | GCACTCAAATGG
---CACTAATT- |
|
|
|
PH0111.1_Nkx2-2/Jaspar
| Match Rank: | 8 |
| Score: | 0.58
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GCACTCAAATGG----
NANTTTCAAGTGGTTAN |
|
|
|
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer
| Match Rank: | 9 |
| Score: | 0.58
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GCACTCAAATGG
TBGCACGCAA---- |
|
|
|
PH0117.1_Nkx3-1/Jaspar
| Match Rank: | 10 |
| Score: | 0.58
| | Offset: | -6
| | Orientation: | forward strand |
| Alignment: | ------GCACTCAAATGG
TACTAAGTACTTAAATG- |
|
|
|
