Information for 16-ATCGCATGGAAT (Motif 8)


Reverse Opposite:

p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets433.0 +/- 0.0bp
Average Position of motif in Background319.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:ATCGCATGGAAT--
----NCTGGAATGC

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:ATCGCATGGAAT--
----CCWGGAATGY

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ATCGCATGGAAT--
----CCWGGAATGY

MA0058.2_MAX/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATCGCATGGAAT
AAGCACATGG---

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ATCGCATGGAAT-
TATTATGGGATGGATAA

MA0147.2_Myc/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATCGCATGGAAT
AAGCACATGG---

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATCGCATGGAAT
GTCACGTGGM--

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ATCGCATGGAAT--
----AATGGAAAAT

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:ATCGCATGGAAT---
---AGATGCAATCCC

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ATCGCATGGAAT
-TBGCACGCAA-