Information for 10-GCAAAAAGCCGC (Motif 10)


Reverse Opposite:

p-value:1e-14
log p-value:-3.257e+01
Information Content per bp:1.924
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets273.4 +/- 160.1bp
Average Position of motif in Background288.9 +/- 121.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)5.86
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAAAGCCGC
CAATTGCAAAAATAT--

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCAAAAAGCCGC---
AGCAACAGCCGCACC

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCAAAAAGCCGC
GGAACAAAGR---

MA0152.1_NFATC2/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCAAAAAGCCGC
TGGAAAA------

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCAAAAAGCCGC
GTAAACAG----

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAAAGCCGC
TACTGGAAAAAAAA---

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCAAAAAGCCGC
VRRACAAWGG---

MA0480.1_Foxo1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCAAAAAGCCGC
TGTAAACAGGA--

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.51
Offset:-8
Orientation:forward strand
Alignment:--------GCAAAAAGCCGC
NNNVCTGWGYAAACASN---

MA0442.1_SOX10/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCAAAAAGCCGC
--ACAAAG----