Information for 12-GCATTCAACTCA (Motif 12)


Reverse Opposite:

p-value:1e-13
log p-value:-3.125e+01
Information Content per bp:1.878
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif25.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets275.3 +/- 183.1bp
Average Position of motif in Background262.1 +/- 146.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.58
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCATTCAACTCA--
ACATTCATGACACG

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCATTCAACTCA-
GACCACATTCATACAAT

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCATTCAACTCA
AGCCACTCAAG---

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCATTCAACTCA
RCATTCCWGG--

MA0090.1_TEAD1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCATTCAACTCA
CACATTCCTCCG-

PB0028.1_Hbp1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GCATTCAACTCA
NNCATTCATTCATNNN-

PB0171.1_Sox18_2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GCATTCAACTCA
NNNNTGAATTCANNNC-

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GCATTCAACTCA
AAGGCGAAATCATCGCA

MA0596.1_SREBF2/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCATTCAACTCA-
---ATCACCCCAT

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCATTCAACTCA
CCTTTGATGT--