Information for 10-GCTCTATGAA (Motif 16)


Reverse Opposite:

p-value:1e-8
log p-value:-2.004e+01
Information Content per bp:1.958
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif29.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets257.4 +/- 166.0bp
Average Position of motif in Background265.4 +/- 154.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTCTATGAA
NGCTN------

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCTCTATGAA--------
---GTATAAAAGGCGGGG

MA0108.2_TBP/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCTCTATGAA--------
---GTATAAAAGGCGGGG

MA0463.1_Bcl6/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCTCTATGAA-
NGCTTTCTAGGAAN

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCTCTATGAA----
ACTATGAATGAATGAT

MA0151.1_ARID3A/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCTCTATGAA-
-----ATTAAA

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCTCTATGAA--
-TTCTTGGAAAN

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCTCTATGAA--
TTTCTNAGAAAN

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCTCTATGAA-------
NTTNTATGAATGTGNNC

PB0005.1_Bbx_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCTCTATGAA---
TAATTCAATGAAGTG