Information for 4-AGCAGTTC (Motif 18)


Reverse Opposite:

p-value:1e-7
log p-value:-1.640e+01
Information Content per bp:1.823
Number of Target Sequences with motif180.0
Percentage of Target Sequences with motif22.84%
Number of Background Sequences with motif7581.0
Percentage of Background Sequences with motif15.63%
Average Position of motif in Targets273.5 +/- 157.0bp
Average Position of motif in Background286.6 +/- 168.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGTTC-
BRRCVGTTDN

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGTTC
CAGCTGTT-

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGCAGTTC
ACAGCTGTTV

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGCAGTTC------
--CACTTCCYCTTT

MA0521.1_Tcf12/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGCAGTTC
NNGCAGCTGTT-

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCAGTTC-
TGGCAGTTGG

PB0047.1_Myf6_1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAGTTC---
CNGACACCTGTTCNNN

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCAGTTC
TGTCGGTT-

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AGCAGTTC-
HWWGTCAGCAWWTTT

MA0499.1_Myod1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGCAGTTC--
TGCAGCTGTCCCT