Information for 19-ACSTAAYGCGTT (Motif 21)


Reverse Opposite:

p-value:1e-6
log p-value:-1.417e+01
Information Content per bp:1.916
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets298.8 +/- 171.2bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0025.1_Dmbx1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACSTAAYGCGTT---
NNNATTAATCCGNTTNA

PH0088.1_Isl2/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACSTAAYGCGTT---
AAATTAATTGATTTNG

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACSTAAYGCGTT---
AAACATAATGAGGTTGC

MA0069.1_Pax6/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACSTAAYGCGTT--
AANTCATGCGTGAA

MA0132.1_Pdx1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACSTAAYGCGTT
--CTAATT----

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ACSTAAYGCGTT---
GACGATAATGAGCTTGC

MA0025.1_NFIL3/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----ACSTAAYGCGTT
ANGTTACATAA------

PH0005.1_Barhl1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ACSTAAYGCGTT---
GNNTTAATTGGTTGTT

PH0108.1_Msx3/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ACSTAAYGCGTT---
NNNTTAATTGGTTTTN

PH0058.1_Hoxb3/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ACSTAAYGCGTT---
TGAGCTAATTAGTTGGA