| p-value: | 1e-6 |
| log p-value: | -1.387e+01 |
| Information Content per bp: | 1.880 |
| Number of Target Sequences with motif | 19.0 |
| Percentage of Target Sequences with motif | 2.41% |
| Number of Background Sequences with motif | 302.1 |
| Percentage of Background Sequences with motif | 0.62% |
| Average Position of motif in Targets | 277.5 +/- 172.2bp |
| Average Position of motif in Background | 271.1 +/- 184.4bp |
| Strand Bias (log2 ratio + to - strand density) | 2.3 |
| Multiplicity (# of sites on avg that occur together) | 2.18 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 1 |
| Score: | 0.72
| | Offset: | 5
| | Orientation: | forward strand |
| Alignment: | TCTGTCTGTCTG-
-----CTGTCTGG |
|
|
|
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 2 |
| Score: | 0.69
| | Offset: | 3
| | Orientation: | forward strand |
| Alignment: | TCTGTCTGTCTG-
---VBSYGTCTGG |
|
|
|
MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar
| Match Rank: | 3 |
| Score: | 0.66
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | TCTGTCTGTCTG--
-CTGTCTGTCACCT |
|
|
|
PB0060.1_Smad3_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.64
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | TCTGTCTGTCTG------
-NNTNNTGTCTGGNNTNG |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 5 |
| Score: | 0.63
| | Offset: | 5
| | Orientation: | forward strand |
| Alignment: | TCTGTCTGTCTG-
-----TWGTCTGV |
|
|
|
MA0498.1_Meis1/Jaspar
| Match Rank: | 6 |
| Score: | 0.63
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -TCTGTCTGTCTG--
AGCTGTCACTCACCT |
|
|
|
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 7 |
| Score: | 0.62
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | TCTGTCTGTCTG--
--TGTCTGDCACCT |
|
|
|
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 8 |
| Score: | 0.59
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | TCTGTCTGTCTG
NCTGTCAATCAN |
|
|
|
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
| Match Rank: | 9 |
| Score: | 0.57
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -TCTGTCTGTCTG
GSCTGTCACTCA- |
|
|
|
POL009.1_DCE_S_II/Jaspar
| Match Rank: | 10 |
| Score: | 0.56
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | TCTGTCTGTCTG
----GCTGTG-- |
|
|
|
