Information for 9-TGTCCTGG (Motif 24)


Reverse Opposite:

p-value:1e-5
log p-value:-1.363e+01
Information Content per bp:1.925
Number of Target Sequences with motif198.0
Percentage of Target Sequences with motif25.13%
Number of Background Sequences with motif8877.7
Percentage of Background Sequences with motif18.30%
Average Position of motif in Targets280.1 +/- 152.2bp
Average Position of motif in Background282.8 +/- 172.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGTCCTGG--
TGACCTTGAV

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGTCCTGG--
TGACCTTGAN

MA0141.2_Esrrb/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGTCCTGG----
TGACCTTGANNN

MA0592.1_ESRRA/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCTGG-
NGTGACCTTGG

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGTCCTGG-
NTGACCTTGA

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGTCCTGG
TGACCT--

MA0505.1_Nr5a2/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCTGG-----
GCTGACCTTGAACTN

MA0160.1_NR4A2/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTGG
GTGACCTT-

MA0071.1_RORA_1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTCCTGG--
TGACCTTGAT

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGTCCTGG-
ATTTCCTGTN