Information for 10-GAAACACT (Motif 25)


Reverse Opposite:

p-value:1e-5
log p-value:-1.352e+01
Information Content per bp:1.786
Number of Target Sequences with motif195.0
Percentage of Target Sequences with motif24.75%
Number of Background Sequences with motif8728.4
Percentage of Background Sequences with motif18.00%
Average Position of motif in Targets292.7 +/- 162.3bp
Average Position of motif in Background281.8 +/- 172.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0087.1_Sox5/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GAAACACT
-NAACAAT

MA0157.1_FOXO3/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAAACACT
TGTAAACA--

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GAAACACT
ACTGAAACCA-

PB0141.1_Isgf3g_2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GAAACACT----
GCAAAACATTACTA

MA0040.1_Foxq1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GAAACACT-
AATAAACAATN

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GAAACACT
AAATAAACA--

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GAAACACT
--AACAAT

MA0084.1_SRY/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAAACACT
GTAAACAAT

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAAACACT
GTAAACAG-

PB0034.1_Irf4_1/Jaspar

Match Rank:10
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GAAACACT-
CGTATCGAAACCAAA