Information for 20-TATGTCACAA (Motif 26)


Reverse Opposite:

p-value:1e-4
log p-value:-1.032e+01
Information Content per bp:1.931
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif171.2
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets303.9 +/- 152.5bp
Average Position of motif in Background264.0 +/- 157.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.83
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TATGTCACAA------
-ATGTCACAACAACAC

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TATGTCACAA---
---GTCACATGAY

MA0025.1_NFIL3/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TATGTCACAA
TTATGTAACAT

MA0466.1_CEBPB/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TATGTCACAA-
TATTGCACAAT

MA0102.3_CEBPA/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TATGTCACAA--
-ATTGCACAATA

MA0033.1_FOXL1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TATGTCACAA
TATGTNTA--

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TATGTCACAA
-ACGTCA---

MA0160.1_NR4A2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TATGTCACAA
AAGGTCAC--

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TATGTCACAA
NATGTTGCAA

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TATGTCACAA
AAYTAGGTCA---