Information for 15-GGTCCCCG (Motif 27)


Reverse Opposite:

p-value:1e-4
log p-value:-9.766e+00
Information Content per bp:1.798
Number of Target Sequences with motif229.0
Percentage of Target Sequences with motif29.06%
Number of Background Sequences with motif11186.9
Percentage of Background Sequences with motif23.06%
Average Position of motif in Targets287.1 +/- 179.0bp
Average Position of motif in Background287.3 +/- 185.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.56
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0056.1_MZF1_1-4/Jaspar

Match Rank:1
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:GGTCCCCG
--TCCCCA

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GGTCCCCG---
NNNGGGGCGCCCCCNN

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGTCCCCG-----
GGGTGTGCCCAAAAGG

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGTCCCCG
AGGTCA---

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGTCCCCG----
NNANTTGACCCCTNNNN

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGTCCCCG
GCTCCG--

PB0156.1_Plagl1_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGTCCCCG-----
NNNNGGTACCCCCCANN

PB0025.1_Glis2_1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGTCCCCG-----
TATCGACCCCCCACAG

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGTCCCCG----
--TTCCCGCCWG

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGTCCCCG----
TCCGCCCCCGCATT