Information for 16-CGCGCACW (Motif 28)


Reverse Opposite:

p-value:1e-4
log p-value:-9.588e+00
Information Content per bp:1.627
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif7.74%
Number of Background Sequences with motif2227.4
Percentage of Background Sequences with motif4.59%
Average Position of motif in Targets253.3 +/- 162.6bp
Average Position of motif in Background282.2 +/- 181.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CGCGCACW----
GCCGCGCAGTGCGT

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CGCGCACW-----
CGAAGCACACAAAATA

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CGCGCACW-----
AGCGGCACACACGCAA

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CGCGCACW---
TGGCGCGCGCGCCTGA

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CGCGCACW---
NTCGCGCGCCTTNNN

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CGCGCACW---
ANCGCGCGCCCTTNN

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCACW--
YCCGCCCACGCN

MA0472.1_EGR2/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CGCGCACW---
CCCCCGCCCACGCAC

MA0506.1_NRF1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGCGCACW---
TGCGCAGGCGC

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGCGCACW
CACGCA--