Information for 3-AAGATATTTCCT (Motif 3)


Reverse Opposite:

p-value:1e-18
log p-value:-4.290e+01
Information Content per bp:1.915
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.66%
Number of Background Sequences with motif75.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets244.8 +/- 151.8bp
Average Position of motif in Background271.4 +/- 182.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.71
Offset:5
Orientation:forward strand
Alignment:AAGATATTTCCT---
-----ATTTCCTGTN

MA0156.1_FEV/Jaspar

Match Rank:2
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:AAGATATTTCCT-
-----ATTTCCTG

MA0136.1_ELF5/Jaspar

Match Rank:3
Score:0.69
Offset:4
Orientation:forward strand
Alignment:AAGATATTTCCT-
----TACTTCCTT

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAGATATTTCCT
CAGCTGTTTCCT

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AAGATATTTCCT---
-----ATTTCCTGTN

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAGATATTTCCT
AAGGATATNTN--

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AAGATATTTCCT--
----CACTTCCTGT

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AAGATATTTCCT-
GACAGAGATATCAGTGT

PB0012.1_Elf3_1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AAGATATTTCCT----
---TTACTTCCTNGTN

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AAGATATTTCCT---
-----ACTTCCTGBT