Information for 24-CTKWCAGV (Motif 32)


Reverse Opposite:

p-value:1e-1
log p-value:-2.910e+00
Information Content per bp:1.709
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.85%
Number of Background Sequences with motif2650.5
Percentage of Background Sequences with motif5.46%
Average Position of motif in Targets260.9 +/- 153.1bp
Average Position of motif in Background285.1 +/- 166.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CTKWCAGV
VGCTGWCAVB

MA0498.1_Meis1/Jaspar

Match Rank:2
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------CTKWCAGV-
NNNTGAGTGACAGCT

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTKWCAGV---
SCTGTCARCACC

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTKWCAGV-
TGTCTGDCACCT

MA0100.2_Myb/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTKWCAGV
CCAACTGCCA--

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CTKWCAGV-
CTGTCTGTCACCT

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTKWCAGV-----
GATATTGACAGCTGCGT

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTKWCAGV
--CACAGN

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTKWCAGV
CTTGGCAA-

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTKWCAGV-----
NNATTGACAGGTGCTT