Information for 5-TCTGAGAATGCT (Motif 5)


Reverse Opposite:

p-value:1e-17
log p-value:-3.963e+01
Information Content per bp:1.956
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif17.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets243.5 +/- 163.7bp
Average Position of motif in Background251.5 +/- 207.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.69
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TCTGAGAATGCT
GNNACCGAGAATNNN

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TCTGAGAATGCT
NTTTCTNAGAAA---

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCTGAGAATGCT
TTCTTGGAAAN--

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCTGAGAATGCT
CSTGGGAAAD--

MA0144.2_STAT3/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCTGAGAATGCT
CTTCTGGGAAA---

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TCTGAGAATGCT
NNNACCGAGAGTNNN

MA0137.3_STAT1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCTGAGAATGCT
TTTCCAGGAAA---

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCTGAGAATGCT
ATTTCCCAGVAKSCY

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCTGAGAATGCT
-CCWGGAATGY-

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TCTGAGAATGCT
TTGACCGAGAATTCC