Information for 7-GTTTCCAACGAA (Motif 7)


Reverse Opposite:

p-value:1e-16
log p-value:-3.741e+01
Information Content per bp:1.975
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets274.9 +/- 127.3bp
Average Position of motif in Background554.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTTTCCAACGAA
ANTTCTNNAGAA

MA0520.1_Stat6/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTTTCCAACGAA--
CATTTCCTGAGAAAT

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GTTTCCAACGAA
--TTCCKNAGAA

MA0152.1_NFATC2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTTTCCAACGAA
TTTTCCA-----

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTTTCCAACGAA
ATTTTCCATT---

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTTTCCAACGAA
HTTTCCCASG--

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTTTCCAACGAA
CGGTTTCAAA----

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTTTCCAACGAA-
GGTTGCCATGGCAA

MA0157.1_FOXO3/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCCAACGAA
TGTTTACA-----

MA0144.2_STAT3/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTTTCCAACGAA
-TTTCCCAGAAN