Information for 1-TCACCATTTCTA (Motif 1)


Reverse Opposite:

p-value:1e-31
log p-value:-7.196e+01
Information Content per bp:1.982
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets105.0 +/- 46.6bp
Average Position of motif in Background75.6 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCACCATTTCTA
HWWGTCAGCAWWTTT-

PB0042.1_Mafk_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCACCATTTCTA
AAGTCAGCANTTTTN

MA0495.1_MAFF/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TCACCATTTCTA
GCTGAGTCAGCAATTTTT

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:4
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TCACCATTTCTA---
NTGACTCANTTTTTCCANTN

MA0496.1_MAFK/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TCACCATTTCTA
CTGAGTCAGCAATTT--

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCACCATTTCTA
TGACCTTTNCNT

MA0109.1_Hltf/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCACCATTTCTA
-AACCTTATAT-

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TCACCATTTCTA-
---CTATTTTTGG

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCACCATTTCTA--
--KCTATTTTTRGH

PB0175.1_Sox4_2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TCACCATTTCTA-
TNCNNAACAATTTTTNC