Information for 6-TGAAAGGGCC (Motif 16)


Reverse Opposite:

p-value:1e-15
log p-value:-3.641e+01
Information Content per bp:1.531
Number of Target Sequences with motif1057.0
Percentage of Target Sequences with motif45.11%
Number of Background Sequences with motif16431.9
Percentage of Background Sequences with motif36.85%
Average Position of motif in Targets116.8 +/- 65.8bp
Average Position of motif in Background117.9 +/- 71.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TGAAAGGGCC--
GGAGAAAGGTGCGA

MA0523.1_TCF7L2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TGAAAGGGCC
AAAGATCAAAGGAA-

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGAAAGGGCC
ACATCAAAGGNA-

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGAAAGGGCC
ACATCAAAGG---

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TGAAAGGGCC-
NANAGATCAAAGGGNNN

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGAAAGGGCC
ACWTCAAAGG---

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TGAAAGGGCC-
NNNAGATCAAAGGANNN

MA0508.1_PRDM1/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TGAAAGGGCC
AGAAAGTGAAAGTGA-

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAAGGGCC
GAAAGTGAAAGT---

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TGAAAGGGCC-
TATAGATCAAAGGAAAA