Information for 8-AGACCGCTTC (Motif 19)


Reverse Opposite:

p-value:1e-13
log p-value:-3.109e+01
Information Content per bp:1.603
Number of Target Sequences with motif536.0
Percentage of Target Sequences with motif22.88%
Number of Background Sequences with motif7498.1
Percentage of Background Sequences with motif16.81%
Average Position of motif in Targets116.1 +/- 68.4bp
Average Position of motif in Background118.3 +/- 73.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AGACCGCTTC-
-----GCTTCC

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGACCGCTTC-
-----GCTCCG

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGACCGCTTC
----NGCTN-

PH0126.1_Obox6/Jaspar

Match Rank:4
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AGACCGCTTC-
CNATAATCCGNTTNT

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGACCGCTTC
AGCGCGCC--

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGACCGCTTC---
TCGTACCCGCATCATT

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGACCGCTTC-------
-ACATGCTACCTAATAC

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AGACCGCTTC
CCAGACAG----

PB0046.1_Mybl1_1/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----AGACCGCTTC---
TTGAAAACCGTTAATTT

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------AGACCGCTTC-
NNNATTAATCCGNTTNA