Information for 14-GTGTCCTCTGCT (Motif 21)


Reverse Opposite:

p-value:1e-12
log p-value:-2.873e+01
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets88.5 +/- 50.7bp
Average Position of motif in Background145.0 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0512.1_Rxra/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCCTCTGCT
NCTGACCTTTG--

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTGTCCTCTGCT
CTGACCTTTG--

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTGTCCTCTGCT---
-TGACCTTTGCCCTA

MA0160.1_NR4A2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGTCCTCTGCT
GTGACCTT----

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTGTCCTCTGCT-
NNNGTGACCTTTGNNN

MA0065.2_PPARG::RXRA/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTGTCCTCTGCT----
-TGACCTTTGCCCTAN

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGTCCTCTGCT---
-TGACCTTTGCCCCA

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTGTCCTCTGCT----
-TGWCCTCARNTGACC

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTGTCCTCTGCT-
NNNNTGACCTTTNNNN

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTGTCCTCTGCT-----
ANAGTGCCACCTGGTGGCCA