Information for 5-CGNGGCCY (Motif 24)


Reverse Opposite:

p-value:1e-11
log p-value:-2.556e+01
Information Content per bp:1.684
Number of Target Sequences with motif869.0
Percentage of Target Sequences with motif37.09%
Number of Background Sequences with motif13620.8
Percentage of Background Sequences with motif30.54%
Average Position of motif in Targets118.8 +/- 68.1bp
Average Position of motif in Background117.3 +/- 73.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.58
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CGNGGCCY
CTAGGCCT

MA0146.2_Zfx/Jaspar

Match Rank:2
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----CGNGGCCY-
GGGGCCGAGGCCTG

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CGNGGCCY
CNAGGCCT

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CGNGGCCY----
NNANTGGTGGTCTTNNN

MA0163.1_PLAG1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGNGGCCY-------
-GGGGCCCAAGGGGG

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGNGGCCY-----
GGCGAGGGGTCAAGGGC

MA0056.1_MZF1_1-4/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGNGGCCY
TGGGGA--

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CGNGGCCY
GGGGGCGGGGCC-

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CGNGGCCY---
NTNTGGGGGGTCNNNA

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGNGGCCY-----
CTCCAGGGGTCAATTGA