Information for 17-CATCCCGGAAGC (Motif 26)


Reverse Opposite:

p-value:1e-10
log p-value:-2.440e+01
Information Content per bp:1.502
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets131.3 +/- 67.3bp
Average Position of motif in Background116.6 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CATCCCGGAAGC
-TTCCNGGAAG-

MA0062.2_GABPA/Jaspar

Match Rank:2
Score:0.74
Offset:4
Orientation:forward strand
Alignment:CATCCCGGAAGC---
----CCGGAAGTGGC

MA0076.2_ELK4/Jaspar

Match Rank:3
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:CATCCCGGAAGC--
---NCCGGAAGTGG

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CATCCCGGAAGC
--ANCCGGAAGT

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CATCCCGGAAGC-
---RCCGGAARYN

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CATCCCGGAAGC
NNCTTCCNGGAAGN

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CATCCCGGAAGC-
---RCCGGAAGTD

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CATCCCGGAAGC
---ACCGGAAG-

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CATCCCGGAAGC
TTTCCNGGAAAN

PB0011.1_Ehf_1/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CATCCCGGAAGC--
AGGACCCGGAAGTAA