Information for 17-GGGTACCCTG (Motif 27)


Reverse Opposite:

p-value:1e-9
log p-value:-2.290e+01
Information Content per bp:1.816
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif573.5
Percentage of Background Sequences with motif1.29%
Average Position of motif in Targets126.5 +/- 61.9bp
Average Position of motif in Background114.3 +/- 68.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GGGTACCCTG--
TTGGGGGCGCCCCTAG

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------GGGTACCCTG-
GCTGGGGGGTACCCCTT

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGGTACCCTG----
GGGTGTGCCCAAAAGG

PB0094.1_Zfp128_1/Jaspar

Match Rank:4
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GGGTACCCTG-
TCTTTGGCGTACCCTAA

MA0056.1_MZF1_1-4/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGTACCCTG
TGGGGA-----

MA0111.1_Spz1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGGTACCCTG
GCTGTTACCCT-

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GGGTACCCTG--
ACTCCAAGTACTTGGAA

MA0112.2_ESR1/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GGGTACCCTG----
GGCCCAGGTCACCCTGACCT

PB0201.1_Zfp281_2/Jaspar

Match Rank:9
Score:0.53
Offset:-8
Orientation:reverse strand
Alignment:--------GGGTACCCTG
NNNATTGGGGGTNTCCT-

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GGGTACCCTG---
AATAGGGTATCATATAT