Information for 18-AACCGGTGGG (Motif 29)


Reverse Opposite:

p-value:1e-9
log p-value:-2.160e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets120.3 +/- 80.6bp
Average Position of motif in Background135.8 +/- 51.8bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0103.2_ZEB1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AACCGGTGGG-
--CAGGTGAGG

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AACCGGTGGG---
TCACCTCTGGGCAG

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AACCGGTGGG
NNCAGGTGNN

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AACCGGTGGG
NHAACBGYYV--

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AACCGGTGGG----
ATCCACAGGTGCGAAAA

PB0047.1_Myf6_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AACCGGTGGG--
GAAGAACAGGTGTCCG

PB0167.1_Sox13_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AACCGGTGGG-----
GTATTGGGTGGGTAATT

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AACCGGTGGG
AACAGATGGC

PB0204.1_Zfp740_2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AACCGGTGGG-----
ANTNCCGGGGGGAANTT

MA0130.1_ZNF354C/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AACCGGTGGG-
-----GTGGAT