Information for 3-TTAGCTGTGGAT (Motif 3)


Reverse Opposite:

p-value:1e-26
log p-value:-6.093e+01
Information Content per bp:1.969
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets100.7 +/- 57.7bp
Average Position of motif in Background93.9 +/- 42.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0479.1_FOXH1/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TTAGCTGTGGAT----
-----TGTGGATTNNN

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TTAGCTGTGGAT---
---NNTGTGGATTSS

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TTAGCTGTGGAT-
---GCTGTGGTTT

MA0130.1_ZNF354C/Jaspar

Match Rank:4
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:TTAGCTGTGGAT
------GTGGAT

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTAGCTGTGGAT-
---NNTGTGGTTT

MA0002.2_RUNX1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTAGCTGTGGAT-
--GTCTGTGGTTT

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTAGCTGTGGAT
---GCTGTG---

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TTAGCTGTGGAT--
----CTGTGGTTTN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTAGCTGTGGAT--
--NNHTGTGGTTWN

MA0009.1_T/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTAGCTGTGGAT
CTAGGTGTGAA-