Information for 20-CATCCCTGGTGT (Motif 31)


Reverse Opposite:

p-value:1e-8
log p-value:-1.957e+01
Information Content per bp:1.972
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets122.5 +/- 56.5bp
Average Position of motif in Background220.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0154.2_EBF1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CATCCCTGGTGT-
--TCCCTGGGGAN

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CATCCCTGGTGT
RCATTCCWGG---

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CATCCCTGGTGT-
-CCCCCTGCTGTG

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CATCCCTGGTGT
RCATTCCWGG---

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CATCCCTGGTGT--
--TCCCNNGGGACN

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CATCCCTGGTGT
GCATTCCAGN---

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CATCCCTGGTGT-
---NNCAGGTGNN

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CATCCCTGGTGT----
-TNTCCTGCTGTGNNG

MA0524.1_TFAP2C/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CATCCCTGGTGT----
-TGCCCTGGGGCNANN

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CATCCCTGGTGT----
-NNTCCTGCTGTGNNN