Information for 19-TGACTACAGC (Motif 32)


Reverse Opposite:

p-value:1e-8
log p-value:-1.894e+01
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets99.1 +/- 61.3bp
Average Position of motif in Background138.9 +/- 57.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGACTACAGC
AAACCACAGC

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGACTACAGC-
ATGACGTCAYYN

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGACTACAGC
NAAACCACAG-

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGACTACAGC-
ATGACGTCATCN

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TGACTACAGC
----CACAGN

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGACTACAGC-
RTGACGTCAYCN

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGACTACAGC-----
TCNCTTTACAGCGNNNT

PH0157.1_Rhox11_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGACTACAGC-----
TCNNTTTACAGCGNNNT

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGACTACAGC-
NWAACCACADNN

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGACTACAGC-
ATGACGTCATCN