Information for 11-CCGAACGG (Motif 33)


Reverse Opposite:

p-value:1e-8
log p-value:-1.886e+01
Information Content per bp:1.687
Number of Target Sequences with motif290.0
Percentage of Target Sequences with motif12.38%
Number of Background Sequences with motif3944.6
Percentage of Background Sequences with motif8.85%
Average Position of motif in Targets115.6 +/- 65.9bp
Average Position of motif in Background117.3 +/- 74.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCGAACGG---
-NHAACBGYYV

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCGAACGG---
-CCAACTGCCA

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CCGAACGG---
---AACCGANA

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCGAACGG-----
CGACCAACTGCCGTG

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCGAACGG------
CGACCAACTGCCATGC

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCGAACGG--
--YAACBGCC

MA0133.1_BRCA1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCGAACGG
-ACAACAC

POL001.1_MTE/Jaspar

Match Rank:8
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------CCGAACGG----
TTTCGAGCGGAACGGTCGC

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCGAACGG--
CCAGACRSVB

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCGAACGG
CCAGACAG