Information for 15-TACGTACS (Motif 34)


Reverse Opposite:

p-value:1e-7
log p-value:-1.667e+01
Information Content per bp:1.620
Number of Target Sequences with motif95.0
Percentage of Target Sequences with motif4.05%
Number of Background Sequences with motif999.6
Percentage of Background Sequences with motif2.24%
Average Position of motif in Targets118.4 +/- 60.2bp
Average Position of motif in Background115.6 +/- 83.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0027.1_Gmeb1_1/Jaspar

Match Rank:1
Score:0.82
Offset:-6
Orientation:reverse strand
Alignment:------TACGTACS---
NNNTNGTACGTAANNNN

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TACGTACS
TACGTGCV

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TACGTACS-
GCACGTACCC

MA0032.1_FOXC1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TACGTACS
TACTNNNN

MA0124.1_NKX3-1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TACGTACS
TAAGTAT-

MA0025.1_NFIL3/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TACGTACS--
TTATGTAACAT

MA0131.1_HINFP/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TACGTACS-
TAACGTCCGC

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TACGTACS
GCACGTAY-

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TACGTACS
GCACGTNC-

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TACGTACS
TGACGT---