Information for 22-ATCACCYRGGTG (Motif 37)


Reverse Opposite:

p-value:1e-4
log p-value:-1.067e+01
Information Content per bp:1.677
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets119.8 +/- 53.7bp
Average Position of motif in Background103.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:ATCACCYRGGTG--
----NNCAGGTGNN

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.60
Offset:7
Orientation:forward strand
Alignment:ATCACCYRGGTG---
-------AGGTGTCA

MA0103.2_ZEB1/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:ATCACCYRGGTG---
------CAGGTGAGG

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATCACCYRGGTG------
-ATCCACAGGTGCGAAAA

MA0009.1_T/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ATCACCYRGGTG----
-----CTAGGTGTGAA

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ATCACCYRGGTG----
----CGTGGGTGGTCC

MA0493.1_Klf1/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:ATCACCYRGGTG-----
------TGGGTGTGGCN

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ATCACCYRGGTG-----
-----NTGGGTGTGGCC

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:ATCACCYRGGTG-------
---GCGGAGGTGTCGCCTC

MA0154.2_EBF1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ATCACCYRGGTG
GTCCCCAGGGA-