Information for 2-TTTGCGGACC (Motif 6)


Reverse Opposite:

p-value:1e-20
log p-value:-4.667e+01
Information Content per bp:1.614
Number of Target Sequences with motif233.0
Percentage of Target Sequences with motif9.94%
Number of Background Sequences with motif2300.0
Percentage of Background Sequences with motif5.16%
Average Position of motif in Targets113.4 +/- 65.9bp
Average Position of motif in Background118.4 +/- 72.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0162.1_Sfpi1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TTTGCGGACC-
CAAATTCCGGAACC

MA0028.1_ELK1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTGCGGACC
CTTCCGGNNN

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TTTGCGGACC
----CGGAGC

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTGCGGACC
NRYTTCCGGY--

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTTGCGGACC--
--DCCGGAARYN

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTGCGGACC
HACTTCCGGY--

MA0081.1_SPIB/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TTTGCGGACC
--AGAGGAA-

MA0056.1_MZF1_1-4/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTTGCGGACC
--TGGGGA--

MA0062.2_GABPA/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTTGCGGACC
NCCACTTCCGG---

MA0076.2_ELK4/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTTGCGGACC
CCACTTCCGGC--