Information for 7-TACACATATACA (Motif 9)


Reverse Opposite:

p-value:1e-19
log p-value:-4.501e+01
Information Content per bp:1.530
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif361.7
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets112.3 +/- 59.6bp
Average Position of motif in Background114.7 +/- 123.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)2.56
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0198.1_Zfp128_2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TACACATATACA
NNTATANATATACN

MA0033.1_FOXL1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TACACATATACA
TATACATA----

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------TACACATATACA
TACATGTGCACATAAAA-

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TACACATATACA-
---GHATATKCAT

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TACACATATACA
---AAATAAACA

MA0030.1_FOXF2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TACACATATACA--
CAAACGTAAACAAT

PB0016.1_Foxj1_1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TACACATATACA
AAAGTAAACAAAAATT

PH0087.1_Irx6/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TACACATATACA---
AAAATACATGTAAAAAT

PH0086.1_Irx5/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TACACATATACA---
AATATACATGTAAAATT

PH0082.1_Irx2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TACACATATACA---
TAAATACATGTAAAATT