Information for 1-ATGGAATGGAAT (Motif 1)


Reverse Opposite:

p-value:1e-30
log p-value:-6.961e+01
Information Content per bp:1.941
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets132.3 +/- 89.5bp
Average Position of motif in Background100.6 +/- 51.3bp
Strand Bias (log2 ratio + to - strand density)4.2
Multiplicity (# of sites on avg that occur together)4.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ATGGAATGGAAT-
TATTATGGGATGGATAA

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ATGGAATGGAAT----
-TTGAATGAAATTCGA

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ATGGAATGGAAT--
----NCTGGAATGC

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATGGAATGGAAT
NNNTATTGAATTGNNN

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ATGGAATGGAAT--
----AATGGAAAAT

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ATGGAATGGAAT--
----CCWGGAATGY

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATGGAATGGAAT---
---AGATGCAATCCC

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATGGAATGGAAT
CCWGGAATGY---

MA0090.1_TEAD1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATGGAATGGAAT
CNGAGGAATGTG--

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATGGAATGGAAT--
ACTATGAATGAATGAT